Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815149.1_cds_XP_016498187.1_12242
CDS Infomation

[gene=LOC107816952] [db_xref=GeneID:107816952] [protein=F-box protein At5g03100-like] [protein_id=XP_016498187.1] [location=complement(join(4221..4523,5350..5520,5979..6962))] [gbkey=CDS]
Sequence

ATGGAAATGCAGAGTAAAATCATGGCGAGAGGAGATCCAGACCGACTCAGTCATTTACCC
GACACAGTTCTACGTCACATCCTCTCTATGTTGCCGGAGGGAAAAGAAGTTGTGAGAACC
AGCGTATTATCTCGGCGATGGCGGTTTCTTTGGAAGTCCGTTGCAGTGTCGCTCAATTTC
GGCGTCCCCAATAATCCCTCTAATGAAATAACCAAAAAGGAACTTCTCACTTTTGTAGCT
TCCACCAGTAGAGAGCTTCACTATTGGAGGTCTTACGGGAAAATCAAAGCATTTAGGGTT
TTTCCTTTTAGATATAAATATTATATTGTTAAAGATGTGGATTTTTGGGTACATTTTGCA
AATAAGGTTGCTAATGTTGAAGAGTTTACACTTAAATTTGTGTGTGTCAGTTTTCCAGAT
TTCGCATATAAGTTTCCTCAGTTTGCGTTTAGGAATTCGACGTTAAGGAATTTGGTATTA
GACAACTGCCAGCTAAACCCTTCTGGTAGTGTGAACTGGAGTAGTCTCGTTTATCTTTCA
ATCGGGCACCTGAAATTGACGGATAATATGTTGGAGAAGATATTGTCGGGTTGCCCTAAC
TTGGAGAGCTTGGAACTGGATAGTGTTTTGGGCATTAGTCGTTTGGAAATCAGTTCTGTG
AAGCTGAGAAAATTGATCATATTAAATGATGAAAATGATGAAAATGATCGTTGTAACAAA
TGGCATGAAGAAGATACCAATTCGCTCGAAATAATTGCCCCGTATATTCAAAATTTGGTA
CTTTCGGGGTTCTTCTACGATGAGATACGCTTGCACGAGAGCAATGTGGCTTCACTTGTC
ACTGCAGTCCTTCATTTTAATGTTGATTTTATTGAATTTGAAGATGAAAAAGAGAAATTG
GAGAAGGAGTGTAGATATTTGAAGGAACTTCTTCTCAGTGTTGCCCATGTCAAGAATCTT
GAATTAGGTCCCTTGTGCATCGAGTGCTTTCCCATACTGGAGTTGAGAGGTTGGCAATTT
CCACCATCAAGCTGCAAATTCTTAAAGCTTAATGCAGCCTTAAAACACTTGGACTTCGCT
GGAATTTACAGCCTTCTGCAGAGTTCATCGGATCTTGAGACATTGATCATTGACTGGAAA
AATCACAAACCATTAGACCGGCTGTTGAGTTACACAAATGAGGGTGAACAGGTCAGGAGG
TTTGAGACACATTATGTTAACTGCTCATTGCCACATCTGAAGACCATCAAGTTCAGTAAC
TTTCTTGGATCATTAAGTGGAATTAAATTTGTACTTCTATTGGTAAAATATCTGCTCAAA
AATGCAACAGTGCTAGAAAAGTTGGTCATTGCTGCTGGATTCATAGGGAATGATGTGTCT
CGGGATAAAATGGAACAGAAGTTCCTGAGCTTTCCAAGATCCTCTCCGCACGCTTCAATT
GTCTTTTCTCATCCATAA

Peptide Sequence

PEP ID

XP_016498187.1
PEP Infomation

PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
Sequence

MEMQSKIMARGDPDRLSHLPDTVLRHILSMLPEGKEVVRTSVLSRRWRFLWKSVAVSLNF
GVPNNPSNEITKKELLTFVASTSRELHYWRSYGKIKAFRVFPFRYKYYIVKDVDFWVHFA
NKVANVEEFTLKFVCVSFPDFAYKFPQFAFRNSTLRNLVLDNCQLNPSGSVNWSSLVYLS
IGHLKLTDNMLEKILSGCPNLESLELDSVLGISRLEISSVKLRKLIILNDENDENDRCNK
WHEEDTNSLEIIAPYIQNLVLSGFFYDEIRLHESNVASLVTAVLHFNVDFIEFEDEKEKL
EKECRYLKELLLSVAHVKNLELGPLCIECFPILELRGWQFPPSSCKFLKLNAALKHLDFA
GIYSLLQSSSDLETLIIDWKNHKPLDRLLSYTNEGEQVRRFETHYVNCSLPHLKTIKFSN
FLGSLSGIKFVLLLVKYLLKNATVLEKLVIAAGFIGNDVSRDKMEQKFLSFPRSSPHASI
VFSHP

Transcript Sequence

Gene sequence data has not been registered.